Sanitize invalid size factors. More...

#include <cmath>
#include <stdexcept>

Include dependency graph for sanitize_size_factors.hpp:

This graph shows which files directly or indirectly include this file:

Classes
struct	scran_norm::SizeFactorDiagnostics
	Diagnostics for the size factors. More...

struct	scran_norm::SanitizeSizeFactorsOptions
	Options for `sanitize_size_factors()`. More...

Namespaces
namespace	scran_norm
	Scaling normalization of single-cell data.

Enumerations
enum class	scran_norm::SanitizeAction : char { IGNORE , ERROR , SANITIZE }

Functions
template<typename SizeFactor_ >
SizeFactorDiagnostics	scran_norm::check_size_factor_sanity (size_t num, const SizeFactor_ *size_factors)

template<typename SizeFactor_ >
void	scran_norm::sanitize_size_factors (size_t num, SizeFactor_ *size_factors, const SizeFactorDiagnostics &status, const SanitizeSizeFactorsOptions &options)

template<typename SizeFactor_ >
SizeFactorDiagnostics	scran_norm::sanitize_size_factors (size_t num, SizeFactor_ *size_factors, const SanitizeSizeFactorsOptions &options)

Detailed Description

Sanitize invalid size factors.

Classes