Choose highly variable genes for downstream analyses. More...
#include <vector>#include <algorithm>#include <numeric>#include <cstdint>
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Classes | |
| struct | scran_variances::ChooseHighlyVariableGenesOptions |
Options for choose_highly_variable_genes(). More... | |
Namespaces | |
| namespace | scran_variances |
| Variance modelling for single-cell expression data. | |
Functions | |
| template<typename Stat_ , typename Bool_ > | |
| void | scran_variances::choose_highly_variable_genes (size_t n, const Stat_ *statistic, Bool_ *output, const ChooseHighlyVariableGenesOptions &options) |
| template<typename Bool_ = uint8_t, typename Stat_ > | |
| std::vector< Bool_ > | scran_variances::choose_highly_variable_genes (size_t n, const Stat_ *statistic, const ChooseHighlyVariableGenesOptions &options) |
| template<typename Index_ , typename Stat_ > | |
| std::vector< Index_ > | scran_variances::choose_highly_variable_genes_index (Index_ n, const Stat_ *statistic, const ChooseHighlyVariableGenesOptions &options) |
Detailed Description
Choose highly variable genes for downstream analyses.
