scran_aggregate::AggregateAcrossCellsResults< Sum_, Detected_ > Struct Template Reference

Results of aggregate_across_cells(). More...

#include <aggregate_across_cells.hpp>

Public Attributes
std::vector< std::vector< Sum_ > >	sums
std::vector< std::vector< Detected_ > >	detected

Detailed Description

template<typename Sum_, typename Detected_>
struct scran_aggregate::AggregateAcrossCellsResults< Sum_, Detected_ >

Results of aggregate_across_cells().

Template Parameters

Sum_	Numeric type of the sum, typically floating-point. If integer, this should be large enough to avoid integer overflow.
Detected_	Type of the number of detected cells, usually integer. This should be large enough to avoid integer overflow.

Member Data Documentation

sums

template<typename Sum_ , typename Detected_ >

std::vector<std::vector<Sum_> > scran_aggregate::AggregateAcrossCellsResults< Sum_, Detected_ >::sums

Vector of length equal to the number of groups. Each inner vector is of length equal to the number of genes. Each entry contains the summed expression across all cells in the corresponding group for each gene.

If AggregateAcrossCellsOptions::compute_sums = false, this vector is empty.

detected

template<typename Sum_ , typename Detected_ >

std::vector<std::vector<Detected_> > scran_aggregate::AggregateAcrossCellsResults< Sum_, Detected_ >::detected

Vector of length equal to the number of groups. Each inner vector is of length equal to the number of genes. Each entry contains the number of cells in the corresponding group with detected expression for each gene.

If AggregateAcrossCellsOptions::compute_detected = false, this vector is empty.

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The documentation for this struct was generated from the following file:

• scran_aggregate/aggregate_across_cells.hpp