cluster_leiden.hpp File Reference

Wrapper around igraph's Leiden community detection algorithm. More...

#include <vector>
#include <algorithm>
#include "raiigraph/raiigraph.hpp"
#include "sanisizer/sanisizer.hpp"
#include "igraph.h"

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Classes
struct	scran_graph_cluster::ClusterLeidenOptions
	Options for cluster_leiden(). More...
struct	scran_graph_cluster::ClusterLeidenResults
	Result of cluster_leiden(). More...

Namespaces
namespace	scran_graph_cluster
	Graph-based clustering of single-cell data.

Functions
void	scran_graph_cluster::cluster_leiden (const igraph_t *graph, const igraph_vector_t *weights, const ClusterLeidenOptions &options, ClusterLeidenResults &output)
ClusterLeidenResults	scran_graph_cluster::cluster_leiden (const raiigraph::Graph &graph, const std::vector< igraph_real_t > &weights, const ClusterLeidenOptions &options)

Detailed Description

Wrapper around igraph's Leiden community detection algorithm.