scran_graph_cluster::ClusterMultilevelResults Struct Reference

Result of cluster_multilevel(). More...

#include <cluster_multilevel.hpp>

Public Attributes
raiigraph::IntegerVector	membership
raiigraph::IntegerMatrix	levels
raiigraph::RealVector	modularity

Detailed Description

Result of cluster_multilevel().

Member Data Documentation

membership

raiigraph::IntegerVector scran_graph_cluster::ClusterMultilevelResults::membership

Vector of length equal to the number of cells, containing 0-indexed cluster identities. This is the same as the row of levels with the maximum modularity.

levels

raiigraph::IntegerMatrix scran_graph_cluster::ClusterMultilevelResults::levels

Matrix of clusterings for each level. Each row corresponds to a level and contains 0-indexed cluster identities for all cells (columns). This should only be used if ClusterMultilevelOptions::report_levels = true.

modularity

raiigraph::RealVector scran_graph_cluster::ClusterMultilevelResults::modularity

Modularity scores at each level. This is of the same length as the number of rows in levels. It should only be used if ClusterMultilevelOptions::report_modularity = true.

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The documentation for this struct was generated from the following file:

• scran_graph_cluster/cluster_multilevel.hpp