scran_markers::ScoreMarkersSummaryResults< Stat_, Rank_ > Struct Template Reference

Results for score_markers_summary() and friends. More...

#include <score_markers_summary.hpp>

Public Attributes
std::vector< std::vector< Stat_ > >	mean
std::vector< std::vector< Stat_ > >	detected
std::vector< SummaryResults< Stat_, Rank_ > >	cohens_d
std::vector< SummaryResults< Stat_, Rank_ > >	auc
std::vector< SummaryResults< Stat_, Rank_ > >	delta_mean
std::vector< SummaryResults< Stat_, Rank_ > >	delta_detected

Detailed Description

template<typename Stat_, typename Rank_>
struct scran_markers::ScoreMarkersSummaryResults< Stat_, Rank_ >

Results for score_markers_summary() and friends.

Template Parameters

Stat_	Floating-point type for the output statistics.
Rank_	Numeric type for the rank.

Member Data Documentation

auc

template<typename Stat_ , typename Rank_ >

std::vector<SummaryResults<Stat_, Rank_> > scran_markers::ScoreMarkersSummaryResults< Stat_, Rank_ >::auc

Vector of length equal to the number of groups, containing the summaries of the AUC for each group. This may be an empty vector if ScoreMarkersSummaryOptions::compute_auc = false.

Individual vectors inside the SummaryResults may also be empty if specified by the relevant option, e.g., ScoreMarkersSummaryOptions::compute_min = false will cause SummaryResults::min to be empty.

cohens_d

template<typename Stat_ , typename Rank_ >

std::vector<SummaryResults<Stat_, Rank_> > scran_markers::ScoreMarkersSummaryResults< Stat_, Rank_ >::cohens_d

Vector of length equal to the number of groups, containing the summaries of the Cohen's d for each group. This may be an empty vector if ScoreMarkersSummaryOptions::compute_cohens_d = false.

Individual vectors inside the SummaryResults may also be empty if specified by the relevant option, e.g., ScoreMarkersSummaryOptions::compute_min = false will cause SummaryResults::min to be empty.

delta_detected

template<typename Stat_ , typename Rank_ >

std::vector<SummaryResults<Stat_, Rank_> > scran_markers::ScoreMarkersSummaryResults< Stat_, Rank_ >::delta_detected

Vector of length equal to the number of groups, containing the summaries of the delta-detected for each group. This may be an empty vector if ScoreMarkersSummaryOptions::compute_delta_detected = false.

Individual vectors inside the SummaryResults may also be empty if specified by the relevant option, e.g., ScoreMarkersSummaryOptions::compute_min = false will cause SummaryResults::min to be empty.

delta_mean

template<typename Stat_ , typename Rank_ >

std::vector<SummaryResults<Stat_, Rank_> > scran_markers::ScoreMarkersSummaryResults< Stat_, Rank_ >::delta_mean

Vector of length equal to the number of groups, containing the summaries of the delta-mean for each group. This may be an empty vector if ScoreMarkersSummaryOptions::compute_delta_mean = false.

Individual vectors inside the SummaryResults may also be empty if specified by the relevant option, e.g., ScoreMarkersSummaryOptions::compute_min = false will cause SummaryResults::min to be empty.

detected

template<typename Stat_ , typename Rank_ >

std::vector<std::vector<Stat_> > scran_markers::ScoreMarkersSummaryResults< Stat_, Rank_ >::detected

Vector of length equal to the number of groups. Each inner vector corresponds to a group and contains the mean expression of each gene in that group.

mean

template<typename Stat_ , typename Rank_ >

std::vector<std::vector<Stat_> > scran_markers::ScoreMarkersSummaryResults< Stat_, Rank_ >::mean

Vector of length equal to the number of groups. Each inner vector corresponds to a group and contains the mean expression of each gene in that group.

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The documentation for this struct was generated from the following file:

• /github/workspace/include/scran_markers/score_markers_summary.hpp