scran_qc::ComputeRnaQcMetricsResults< Sum_, Detected_, Proportion_ > Struct Template Reference

Results of compute_rna_qc_metrics(). More...

#include <rna_quality_control.hpp>

Public Attributes
std::vector< Sum_ >	sum
std::vector< Detected_ >	detected
std::vector< std::vector< Proportion_ > >	subset_proportion

Detailed Description

template<typename Sum_ = double, typename Detected_ = int, typename Proportion_ = double>
struct scran_qc::ComputeRnaQcMetricsResults< Sum_, Detected_, Proportion_ >

Results of compute_rna_qc_metrics().

Template Parameters

Sum_	Numeric type to store the summed expression.
Detected_	Integer type to store the number of cells.
Proportion_	Floating-point type to store the proportions.

Member Data Documentation

sum

template<typename Sum_ = double, typename Detected_ = int, typename Proportion_ = double>

std::vector<Sum_> scran_qc::ComputeRnaQcMetricsResults< Sum_, Detected_, Proportion_ >::sum

Vector of length equal to the number of cells in the dataset, containing the sum of counts for each cell.

detected

template<typename Sum_ = double, typename Detected_ = int, typename Proportion_ = double>

std::vector<Detected_> scran_qc::ComputeRnaQcMetricsResults< Sum_, Detected_, Proportion_ >::detected

Vector of length equal to the number of cells in the dataset, containing the number of detected features in each cell.

subset_proportion

template<typename Sum_ = double, typename Detected_ = int, typename Proportion_ = double>

std::vector<std::vector<Proportion_> > scran_qc::ComputeRnaQcMetricsResults< Sum_, Detected_, Proportion_ >::subset_proportion

Proportion of counts in each feature subset in each cell. Each inner vector corresponds to a feature subset and is of length equal to the number of cells.

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The documentation for this struct was generated from the following file:

• scran_qc/rna_quality_control.hpp