simple.hpp File Reference

Compute distances to nearest neighbors. More...

#include <vector>
#include <stdexcept>
#include <cmath>
#include <algorithm>
#include <limits>
#include <cstddef>
#include <type_traits>
#include "knncolle/knncolle.hpp"
#include "tatami_stats/tatami_stats.hpp"
#include "sanisizer/sanisizer.hpp"
#include "utils.hpp"

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Classes
struct	mumosa::Options
	Options for compute_distance(). More...

Namespaces
namespace	mumosa
	Scale multi-modal embeddings to adjust for differences in variance.

Functions
template<typename Index_ , typename Distance_ >
std::pair< Distance_, Distance_ >	mumosa::compute_distance (const Index_ num_cells, Distance_ *const distances)
template<typename Index_ , typename Input_ , typename Distance_ >
std::pair< Distance_, Distance_ >	mumosa::compute_distance (const knncolle::Prebuilt< Index_, Input_, Distance_ > &prebuilt, Distance_ *const distances, const Options &options)
template<typename Index_ , typename Input_ , typename Distance_ , class Matrix_ = knncolle::Matrix<Index_, Input_>>
std::pair< Distance_, Distance_ >	mumosa::compute_distance (const std::size_t num_dim, const Index_ num_cells, const Input_ *const data, const knncolle::Builder< Index_, Input_, Distance_, Matrix_ > &builder, const Options &options)

Detailed Description

Compute distances to nearest neighbors.