scran_graph_cluster
Graph-based clustering of cells
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Wrapper around igraph's multi-level community detection algorithm. More...
#include <vector>
#include <algorithm>
#include "raiigraph/raiigraph.hpp"
#include "igraph.h"
Go to the source code of this file.
Classes | |
struct | scran_graph_cluster::ClusterMultilevelOptions |
Options for cluster_multilevel() . More... | |
struct | scran_graph_cluster::ClusterMultilevelResults |
Result of cluster_multilevel() . More... | |
Namespaces | |
namespace | scran_graph_cluster |
Graph-based clustering of single-cell data. | |
Functions | |
void | scran_graph_cluster::cluster_multilevel (const igraph_t *graph, const igraph_vector_t *weights, const ClusterMultilevelOptions &options, ClusterMultilevelResults &output) |
ClusterMultilevelResults | scran_graph_cluster::cluster_multilevel (const raiigraph::Graph &graph, const std::vector< igraph_real_t > &weights, const ClusterMultilevelOptions &options) |
Wrapper around igraph's multi-level community detection algorithm.