scran_graph_cluster
Graph-based clustering of cells
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Classes | Namespaces | Functions
cluster_multilevel.hpp File Reference

Wrapper around igraph's multi-level community detection algorithm. More...

#include <vector>
#include <algorithm>
#include "raiigraph/raiigraph.hpp"
#include "igraph.h"
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Classes

struct  scran_graph_cluster::ClusterMultilevelOptions
 Options for cluster_multilevel(). More...
 
struct  scran_graph_cluster::ClusterMultilevelResults
 Result of cluster_multilevel(). More...
 

Namespaces

namespace  scran_graph_cluster
 Graph-based clustering of single-cell data.
 

Functions

void scran_graph_cluster::cluster_multilevel (const igraph_t *graph, const igraph_vector_t *weights, const ClusterMultilevelOptions &options, ClusterMultilevelResults &output)
 
ClusterMultilevelResults scran_graph_cluster::cluster_multilevel (const raiigraph::Graph &graph, const std::vector< igraph_real_t > &weights, const ClusterMultilevelOptions &options)
 

Detailed Description

Wrapper around igraph's multi-level community detection algorithm.