cluster_walktrap.hpp File Reference

Wrapper around igraph's Walktrap community detection algorithm. More...

#include <vector>
#include <algorithm>
#include "raiigraph/raiigraph.hpp"
#include "sanisizer/sanisizer.hpp"
#include "igraph.h"

Include dependency graph for cluster_walktrap.hpp:

This graph shows which files directly or indirectly include this file:

Go to the source code of this file.

Classes
struct	scran_graph_cluster::ClusterWalktrapOptions
	Options for cluster_walktrap(). More...
struct	scran_graph_cluster::ClusterWalktrapResults
	Result of cluster_walktrap(). More...

Namespaces
namespace	scran_graph_cluster
	Graph-based clustering of single-cell data.

Functions
void	scran_graph_cluster::cluster_walktrap (const igraph_t *graph, const igraph_vector_t *weights, const ClusterWalktrapOptions &options, ClusterWalktrapResults &output)
ClusterWalktrapResults	scran_graph_cluster::cluster_walktrap (const raiigraph::Graph &graph, const std::vector< igraph_real_t > &weights, const ClusterWalktrapOptions &options)

Detailed Description

Wrapper around igraph's Walktrap community detection algorithm.