center_spike_in_factors.hpp File Reference

Center size factors for endogenous genes and spike-in transcripts. More...

#include "center_size_factors.hpp"
#include "utils.hpp"

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Classes
struct	scran_norm::CenterSpikeInFactorsOptions
	Options for center_spike_in_factors(). More...
struct	scran_norm::CenterSpikeInFactorsBlockedOptions
	Options for center_spike_in_factors_blocked(). More...

Namespaces
namespace	scran_norm
	Scaling normalization of single-cell data.

Functions
template<typename SizeFactor_ >
void	scran_norm::center_spike_in_factors (const std::size_t num, SizeFactor_ *const endogenous, const std::vector< SizeFactor_ * > &spike_ins, const CenterSpikeInFactorsOptions &options)
template<typename SizeFactor_ , typename Block_ >
std::vector< SizeFactor_ >	scran_norm::center_spike_in_factors_blocked (const std::size_t num, SizeFactor_ *const endogenous, const std::vector< SizeFactor_ * > &spike_ins, const Block_ *const block, const CenterSpikeInFactorsBlockedOptions &options)

Detailed Description

Center size factors for endogenous genes and spike-in transcripts.