scran_variances::ModelGeneVariancesBlockedBuffers< Stat_ > Struct Template Reference

Buffers for model_gene_variances_blocked(). More...

#include <model_gene_variances.hpp>

Public Attributes
std::vector< ModelGeneVariancesBuffers< Stat_ > >	per_block
ModelGeneVariancesBuffers< Stat_ >	average

Detailed Description

template<typename Stat_>
struct scran_variances::ModelGeneVariancesBlockedBuffers< Stat_ >

Buffers for model_gene_variances_blocked().

Template Parameters

Stat_

Floating-point type of the output statistics.

Member Data Documentation

per_block

template<typename Stat_ >

std::vector<ModelGeneVariancesBuffers<Stat_> > scran_variances::ModelGeneVariancesBlockedBuffers< Stat_ >::per_block

Vector of length equal to the number of blocks, where each entry contains the buffers to store the variance modelling results for a single block.

average

template<typename Stat_ >

ModelGeneVariancesBuffers<Stat_> scran_variances::ModelGeneVariancesBlockedBuffers< Stat_ >::average

Buffers to store the average across blocks for all statistics in per_block.

Any of the pointers in this object may be NULL, in which case the corresponding average is not computed.

If average.fitted or average.residuals is not NULL, all entries of per_block should have non-NULL pointers for their own fitted and residuals. (That is, a mean-variance trend should have been fitted in each block.) Otherwise, an error will be thrown.

---

The documentation for this struct was generated from the following file:

• scran_variances/model_gene_variances.hpp