scran_qc Directory Reference

Files
	adt_quality_control.hpp
	Simple per-cell QC metrics from an ADT count matrix.
	choose_filter_thresholds.hpp
	Define QC filter thresholds using a MAD-based approach.
	crispr_quality_control.hpp
	Simple per-cell QC metrics from a CRISPR count matrix.
	find_median_mad.hpp
	Compute the median and MAD from an array of values.
	format_filters.hpp
	Format QC filters for downstream analysis.
	per_cell_qc_metrics.hpp
	Compute per-cell quality control metrics.
	rna_quality_control.hpp
	Simple per-cell QC metrics from an RNA count matrix.
	scran_qc.hpp
	Simple quality control for single-cell data.